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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877514.1_cds_XP_016436479.1_32336
CDS Infomation

[gene=LOC107762626] [db_xref=GeneID:107762626] [protein=protein PHR1-LIKE 1-like] [protein_id=XP_016436479.1] [location=complement(join(6809..7168,8746..8815,9036..9093,9421..9460,9549..9625,9735..9918,10668..11303))] [gbkey=CDS]
Sequence

ATGGACATGCGCCGTACATTATGTATTCAAAGATCTAGTGAAGCACAACACAGCAACATG
GGTGTCTCTGGAGCTATGTCAACATCTTTATCCATTTTGCCGTCATTGGAAGAGAAGTAT
CTGAAATTGCCAGATTCTCTGTATGTGTTCACAGAAAAGGAGCGAACCGCAAACCTCATT
TCCTCACAGGCAATCCCATCAGCATCTAGGAGTGGAACAGTAGGGCATCTATTATCTTCC
TCTTCTGGACCACAGAAAGATTTTCACTTTTCTCCTACCTCTTCTCAAGAAAATAGGCAA
CATAACTATGCATTTATTTCAAGTGAAGCTTCTGCAGCGACCTGCCAATCTTCACTCTTA
TGTATGCATTCGACATCATTGGATAATTACCCTATTGGGAACAGCAGTAATTCCTGGGGC
AAAGATGCATATCATGACTTCACCAATTTTCCTACGAATGTTCCTGTTCAGAATGGCCGA
GTGGAAAACCTTCCAGTTGTCATGGCATCTGATGACCATGCTAAGAGATCTGATTGGCAG
GAGTGGGCTGATCAGCTAATTAATGATGATGATGTTTTGCATTCGAGCTGGAGCAATATT
CTTGTTGATGTCAATCCTCCAGATTCAGAACCTAAGCTGCTTGGAGCATCTGAAGTCCTT
GCTTGTCGGCCCCAACCTACTCCTATTGCACCTTGCGAGCAAAGTTTCCCAGTTGGTAGC
CCGTCATCTTCCACAGCGTTGACGAAATCTCGTATGCGTTGGACACCTGAGCTTCATGAA
GTCTTTGTAGAAGCTGTCAGTAAGCTTGGCGGTAGCGAAAAAGCTACACCAAAGGGTGTC
TTGAAGCTCATGAATGTTGAAGGCCTAACCATCTATCATGTCAAAAGCCACTTGCAGAAA
TATAGAACTGCCAGATACAAACCAGAACCATCGGAAGGAACACCGGAAAAGAAGCCCACC
AGTGTGACAGAGATGCCATCTTTGGACCTGAAAGCGACTATGGGGATAACAGAGGCACTA
AGAATGCAGATGGAAGTCCAAAAGCAGCTTCATGAACAACTTGAGATCCAAAGAAAGTTG
CAGTTGCGGATTGAAGAACAGGGTAAATACCTCGAAATGATGTTTGAGAAGACAAAAGGC
ATGGGGAAAGATCTAAAGATATCATCATCACTAAAAACAGATGAACATCCTTCACCATCC
ACCAAGACGAAGCATTTGCCTCCCAACGATAAATCAGAAGCACTAGAGCAGGATCCTCTT
AGTTCGAACAATGCTTCAAGTTCCGCAGGGGAGTTTACACATGGCAAAAACAAGGAAGGG
AACTCACTGGAAAGGGAAACTTGTGAAGATCACGGCTCAGATGTTAGAGACTTGTGTTCA
CCTCCATCGAAACGAGCAAAAACTGAGGAAACATCAGCTTCATGA

Peptide Sequence

PEP ID

XP_016436479.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like [Nicotiana tabacum]
Sequence

MDMRRTLCIQRSSEAQHSNMGVSGAMSTSLSILPSLEEKYLKLPDSLYVFTEKERTANLI
SSQAIPSASRSGTVGHLLSSSSGPQKDFHFSPTSSQENRQHNYAFISSEASAATCQSSLL
CMHSTSLDNYPIGNSSNSWGKDAYHDFTNFPTNVPVQNGRVENLPVVMASDDHAKRSDWQ
EWADQLINDDDVLHSSWSNILVDVNPPDSEPKLLGASEVLACRPQPTPIAPCEQSFPVGS
PSSSTALTKSRMRWTPELHEVFVEAVSKLGGSEKATPKGVLKLMNVEGLTIYHVKSHLQK
YRTARYKPEPSEGTPEKKPTSVTEMPSLDLKATMGITEALRMQMEVQKQLHEQLEIQRKL
QLRIEEQGKYLEMMFEKTKGMGKDLKISSSLKTDEHPSPSTKTKHLPPNDKSEALEQDPL
SSNNASSSAGEFTHGKNKEGNSLERETCEDHGSDVRDLCSPPSKRAKTEETSAS

Transcript Sequence

Gene sequence data has not been registered.